Z. japonica Nagirizaki
Zjn_sc00127.1.g00450.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR gb|EAY90244.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 422 18 417 6e-43 107.3 35.1 49.5
Subject 453 28 450
Annot hypothetical protein OsI_11818 [Oryza sativa Indica Group]
IRGSP Os03t0372900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 422 103 405 4e-36 100.9 29.6 38.9
Subject 426 113 402
Annot
Sbicolor Sobic.009G253500.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 422 4 317 1e-12 98.8 22.5 34.1
Subject 417 17 333
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00127.1.g00450.1.sm.mk length: 422 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.8e-08 2-41
HMMSmart SM00256 A 7.9e-07 4-44
ProfileScan PS50181 FBOX 10.743 1-47
superfamily SSF81383 F-box 1.1e-11 1-40
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 5e-11 231-360
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 7e-18 123-347
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 6e-08 1-38
Seg seg seg NA 26-37
45-57
345-357
368-384
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00127.1 maker_non_over exon 353441 354709 . - . ID=Zjn_sc00127.1.g00450.1.sm.mk:exon:1

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