Z. japonica Nagirizaki
Zjn_sc00122.1.g00290.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 105 343 1e-77 68 39 44.3
Subject 282 1 278
Annot | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282
NR ref|XP_004957488.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 105 343 e-120 59.3 52.8 54.2
Subject 246 1 242
Annot PREDICTED: myb-related protein Hv1 [Setaria italica]
IRGSP Os09t0538400-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 105 343 e-115 60.5 50.8 53
Subject 251 1 247
Annot
Sbicolor Sobic.002G279100.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 105 343 e-117 63.6 53 54.2
Subject 264 1 260
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00122.1.g00290.1.am.mk length: 415 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 2.2e-15 118-165
171-215
HMMSmart SM00717 SANT 1.7e-17 117-167
170-218
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 8.6e-27 109-168
169-220
superfamily SSF46689 Homeodomain-like 5.5e-26 118-217
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 16.580 166-220
113-165
no_ID  
HMMPanther PTHR10641 MYB-LIKE 7.4e-101 103-236
HMMPanther PTHR10641:SF203SUBFAMILY NOT 7.4e-101 103-236
Seg seg seg NA 55-80
367-385
Pseudomolecule
Chromosome Start End Strand
191108548711087797+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00122.1 maker_non_over exon 155998 156090 . + . ID=Zjn_sc00122.1.g00290.1.am.mk:exon:1
Zjn_sc00122.1 maker_non_over exon 156220 156701 . + . ID=Zjn_sc00122.1.g00290.1.am.mk:exon:2
Zjn_sc00122.1 maker_non_over exon 156836 157287 . + . ID=Zjn_sc00122.1.g00290.1.am.mk:exon:3
Zjn_sc00122.1 maker_non_over exon 158088 158308 . + . ID=Zjn_sc00122.1.g00290.1.am.mk:exon:4

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