Z. japonica Nagirizaki
Zjn_sc00121.1.g00260.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G25050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 367 8 304 1e-76 302.7 45.8 56.9
Subject 1111 807 1099
Annot | Symbols: | Actin-binding FH2 (Formin Homology) protein | chr2:10654108-10659383 REVERSE LENGTH=1111
NR ref|XP_008678461.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 367 8 353 e-105 377.6 63.2 69.5
Subject 1386 1020 1353
Annot PREDICTED: formin-like protein 6 isoform X1 [Zea mays]
IRGSP Os08t0280200-02_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 367 8 360 1e-96 243.3 58 65.1
Subject 893 556 893
Annot
Sbicolor Sobic.004G329400.2.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 367 9 360 1e-73 327.2 46.9 61.6
Subject 1201 848 1190
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00121.1.g00260.1.sm.mk length: 367 aa.
IPR015425 Formin, FH2 domain
method AccNumber shortName E-value location
HMMPfam PF02181 FH2 5.5e-17 8-83
173-281
ProfileScan PS51444 FH2 12.019 1-307
superfamily SSF101447 Formin 5.1e-12 173-313
8-84
IPR027643 Formin-like family, viridiplantae
Cellular Component GO:0005884 actin filament    
Biological Process GO:0045010 actin nucleation    
HMMPanther PTHR23213:SF18 FORMIN-RELATED 4.2e-75 8-306
no_ID  
Coil coil coiled-coil NA 199-227
282-357
HMMPanther PTHR23213 FORMIN-RELATED 4.2e-75 8-306
Seg seg seg NA 4-24
93-106
290-305
349-360
Pseudomolecule
Chromosome Start End Strand
1434679673490482+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00121.1 maker_non_over exon 214075 214097 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:11
Zjn_sc00121.1 maker_non_over exon 227512 227784 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:10
Zjn_sc00121.1 maker_non_over exon 227875 227941 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:9
Zjn_sc00121.1 maker_non_over exon 228552 228587 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:8
Zjn_sc00121.1 maker_non_over exon 229191 229307 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:7
Zjn_sc00121.1 maker_non_over exon 229405 229476 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:6
Zjn_sc00121.1 maker_non_over exon 231910 232173 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:5
Zjn_sc00121.1 maker_non_over exon 234956 235006 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:4
Zjn_sc00121.1 maker_non_over exon 235096 235176 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:3
Zjn_sc00121.1 maker_non_over exon 235614 235712 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:2
Zjn_sc00121.1 maker_non_over exon 236570 236590 . - . ID=Zjn_sc00121.1.g00260.1.sm.mk:exon:1

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