Z. japonica Nagirizaki
Zjn_sc00120.1.g00070.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G05170.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
1356 |
139 |
1199 |
0.0 |
78.5 |
62.5 |
68.7 |
| Subject |
1065 |
18 |
1060 |
|
| Annot |
| Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellulose synthase family protein | chr5:1530401-1535090 REVERSE LENGTH=1065 |
| NR |
ref|NP_001059162.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
1356 |
129 |
1191 |
0.0 |
79.7 |
76 |
76.8 |
| Subject |
1081 |
7 |
1068 |
|
| Annot |
Os07g0208500 [Oryza sativa Japonica Group] gi|75149238|sp|Q84ZN6.1|CESA8_ORYSJ RecName: Full=Probable cellulose synthase A catalytic subunit 8 [UDP-forming]; AltName: Full=OsCesA8 gi|28411807|dbj|BAC57282.1| cellulose synthase-4 [Oryza sativa Japonica Group] gi|50509108|dbj|BAD30175.1| cellulose synthase-4 [Oryza sativa Japonica Group] gi|113610698|dbj|BAF21076.1| Os07g0208500 [Oryza sativa Japonica Group] gi|125599508|gb|EAZ39084.1| hypothetical protein OsJ_23516 [Oryza sativa Japonica Group] gi|215701511|dbj|BAG92935.1| unnamed protein product [Oryza sativa Japonica Group] |
| IRGSP |
Os07t0208500-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
1356 |
129 |
1191 |
0.0 |
79.7 |
76 |
76.8 |
| Subject |
1081 |
7 |
1068 |
|
| Annot |
|
| Sbicolor |
Sobic.002G075500.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
1356 |
129 |
1191 |
0.0 |
79.7 |
76.1 |
77 |
| Subject |
1081 |
7 |
1068 |
|
| Annot |
|
InterProScan
No data.
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00120.1 |
maker |
exon |
114423 |
114500 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:18 |
| Zjn_sc00120.1 |
maker |
exon |
114623 |
114783 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:17 |
| Zjn_sc00120.1 |
maker |
exon |
114883 |
115141 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:16 |
| Zjn_sc00120.1 |
maker |
exon |
116462 |
117004 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:15 |
| Zjn_sc00120.1 |
maker |
exon |
117086 |
117436 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:14 |
| Zjn_sc00120.1 |
maker |
exon |
117854 |
118056 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:13 |
| Zjn_sc00120.1 |
maker |
exon |
118164 |
118425 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:12 |
| Zjn_sc00120.1 |
maker |
exon |
118520 |
118732 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:11 |
| Zjn_sc00120.1 |
maker |
exon |
118814 |
118939 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:10 |
| Zjn_sc00120.1 |
maker |
exon |
119027 |
119164 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:9 |
| Zjn_sc00120.1 |
maker |
exon |
119251 |
119596 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:8 |
| Zjn_sc00120.1 |
maker |
exon |
119692 |
119958 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:7 |
| Zjn_sc00120.1 |
maker |
exon |
120260 |
120449 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:6 |
| Zjn_sc00120.1 |
maker |
exon |
120542 |
120641 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:5 |
| Zjn_sc00120.1 |
maker |
exon |
120718 |
120968 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:4 |
| Zjn_sc00120.1 |
maker |
exon |
121356 |
121545 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:3 |
| Zjn_sc00120.1 |
maker |
exon |
121673 |
121957 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:2 |
| Zjn_sc00120.1 |
maker |
exon |
122061 |
122168 |
. |
- |
. |
ID=Zjn_sc00120.1.g00070.1.am.mkhc:exon:1 |