Z. japonica Nagirizaki
Zjn_sc00119.1.g00150.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 949 85 945 0.0 117.1 65.4 75.9
Subject 1111 15 848
Annot | Symbols: ATCSLD4, CSLD4 | cellulose synthase like D4 | chr4:17910096-17913641 REVERSE LENGTH=1111
NR ref|XP_008664736.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 949 63 945 0.0 120.8 84.9 88.5
Subject 1146 1 887
Annot PREDICTED: cellulose synthase-like protein D3 [Zea mays] gi|414870686|tpg|DAA49243.1| TPA: putative cellulose synthase-like family protein [Zea mays]
IRGSP Os08t0345500-00_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 949 63 945 0.0 120.8 82.3 86.6
Subject 1146 1 886
Annot
Sbicolor Sobic.007G100800.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 949 63 945 0.0 121 84.5 88.2
Subject 1148 1 889
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00119.1.g00150.1.am.mk length: 949 aa.
IPR005150 Cellulose synthase
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016760 cellulose synthase (UDP-forming) activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03552 Cellulose_synt 3.2e-214 438-945
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-13 178-255
no_ID  
HMMPanther PTHR32287 FAMILY 0 202-945
HMMPanther PTHR32287:SF6 SUBFAMILY 0 202-945
HMMPfam PF14570 zf-RING_4 3.2e-12 196-244
Seg seg seg NA 80-91
307-330
354-366
453-465
superfamily SSF57850 RING/U-box 2.5e-08 176-264
Pseudomolecule
Chromosome Start End Strand
1428211202823969-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00119.1 maker_non_over exon 104708 107557 . + . ID=Zjn_sc00119.1.g00150.1.am.mk:exon:1

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