Z. japonica Nagirizaki
Zjn_sc00118.1.g00440.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR gb|EAY93154.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 309 18 285 3e-74 126.5 49.2 61.8
Subject 391 19 275
Annot hypothetical protein OsI_14960 [Oryza sativa Indica Group]
IRGSP Os04t0195100-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 309 15 288 2e-51 123.6 42.1 51.8
Subject 382 11 273
Annot
Sbicolor Sobic.001G400200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 309 2 280 2e-40 128.8 35 50.2
Subject 398 1 278
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00118.1.g00440.1.sm.mk length: 309 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 8.5e-05 20-61
superfamily SSF81383 F-box 2e-10 7-152
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4.6e-07 17-53
HMMPfam PF12937 F-box-like 7.7e-06 20-55
Seg seg seg NA 2-19
Pseudomolecule
Chromosome Start End Strand
1113155911319239+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00118.1 maker_non_over exon 657635 657640 . - . ID=Zjn_sc00118.1.g00440.1.sm.mk:exon:3
Zjn_sc00118.1 maker_non_over exon 659324 659383 . - . ID=Zjn_sc00118.1.g00440.1.sm.mk:exon:2
Zjn_sc00118.1 maker_non_over exon 660420 661283 . - . ID=Zjn_sc00118.1.g00440.1.sm.mk:exon:1

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