Z. japonica Nagirizaki
Zjn_sc00113.1.g00240.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G27740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 94 141 2e-12 181.7 22.5 29.6
Subject 258 184 253
Annot | Symbols: RSL4 | root hair defective 6-like 4 | chr1:9654753-9655806 FORWARD LENGTH=258
NR gb|EMT06884.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 1 137 5e-19 127.5 44.4 59.2
Subject 181 1 172
Annot Transcription factor bHLH84 [Aegilops tauschii]
IRGSP Os12t0589000-00_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 77 137 4e-13 214.1 27.5 32.4
Subject 304 214 298
Annot
Sbicolor Sobic.001G166700.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 94 137 2e-13 211.3 24.6 28.9
Subject 300 227 292
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00113.1.g00240.1.sm.mk length: 142 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR31090 FAMILY 2.7e-13 94-138
Pseudomolecule
Chromosome Start End Strand
1549953594996427+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00113.1 maker_non_over exon 208646 208908 . + . ID=Zjn_sc00113.1.g00240.1.sm.mk:exon:1
Zjn_sc00113.1 maker_non_over exon 209051 209066 . + . ID=Zjn_sc00113.1.g00240.1.sm.mk:exon:2
Zjn_sc00113.1 maker_non_over exon 209213 209278 . + . ID=Zjn_sc00113.1.g00240.1.sm.mk:exon:3
Zjn_sc00113.1 maker_non_over exon 209565 209633 . + . ID=Zjn_sc00113.1.g00240.1.sm.mk:exon:4
Zjn_sc00113.1 maker_non_over exon 209700 209714 . + . ID=Zjn_sc00113.1.g00240.1.sm.mk:exon:5

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