Z. japonica Nagirizaki
Zjn_sc00112.1.g00870.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT1G32583.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
59 |
181 |
2e-28 |
98.4 |
31.9 |
44.5 |
| Subject |
179 |
59 |
178 |
|
| Annot |
| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11787351-11788103 FORWARD LENGTH=179 |
| NR |
ref|XP_004972167.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
59 |
182 |
5e-38 |
93.4 |
42.3 |
53.3 |
| Subject |
170 |
40 |
170 |
|
| Annot |
PREDICTED: TPD1 protein homolog 1B-like [Setaria italica] |
| IRGSP |
Os10t0207500-01_chr10_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
45 |
182 |
6e-34 |
92.9 |
39 |
49.5 |
| Subject |
169 |
28 |
169 |
|
| Annot |
|
| Sbicolor |
Sobic.001G254700.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
5 |
182 |
3e-39 |
95.6 |
50 |
62.1 |
| Subject |
174 |
4 |
174 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00112.1.g00870.1.sm.mk |
length: 182 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
33-55 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00112.1 |
maker_non_over |
exon |
612576 |
612922 |
. |
- |
. |
ID=Zjn_sc00112.1.g00870.1.sm.mk:exon:2 |
| Zjn_sc00112.1 |
maker_non_over |
exon |
613015 |
613216 |
. |
- |
. |
ID=Zjn_sc00112.1.g00870.1.sm.mk:exon:1 |