Z. japonica Nagirizaki
Zjn_sc00112.1.g00680.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT5G07100.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
115 |
1 |
103 |
3e-13 |
187.8 |
31.3 |
50.4 |
| Subject |
216 |
17 |
120 |
|
| Annot |
| Symbols: WRKY26 | WRKY DNA-binding protein 26 | chr5:2204813-2205647 FORWARD LENGTH=216 |
| NR |
No_hits |
| IRGSP |
Os07t0596900-00_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
115 |
7 |
74 |
5e-13 |
375.6 |
27 |
36.5 |
| Subject |
432 |
169 |
235 |
|
| Annot |
|
| Sbicolor |
Sobic.007G072500.2.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
115 |
6 |
104 |
2e-18 |
719.1 |
45.2 |
56.5 |
| Subject |
827 |
40 |
139 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00112.1.g00680.1.am.mk |
length: 115 aa. |
| IPR003657 |
DNA-binding WRKY |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| Molecular Function |
GO:0043565 |
sequence-specific DNA binding |
|
|
| Gene3D |
G3DSA:2.20.25.80 |
no description |
2.3e-11 |
7-67 |
| HMMPfam |
PF03106 |
WRKY |
4.4e-12 |
8-65 |
| HMMSmart |
SM00774 |
DNA |
0.00011 |
7-66 |
| ProfileScan |
PS50811 |
WRKY |
14.561 |
2-67 |
| superfamily |
SSF118290 |
WRKY |
3.7e-12 |
1-68 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00112.1 |
maker_non_over |
exon |
449624 |
449971 |
. |
+ |
. |
ID=Zjn_sc00112.1.g00680.1.am.mk:exon:1 |