Z. japonica Nagirizaki
Zjn_sc00112.1.g00480.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37260.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 5 169 9e-28 161.9 29.1 40
Subject 429 7 223
Annot | Symbols: TTG2, ATWRKY44, WRKY44, DSL1 | WRKY family transcription factor family protein | chr2:15645277-15646792 FORWARD LENGTH=429
NR ref|XP_012702540.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 1 179 2e-60 66.8 46.8 52.1
Subject 177 1 175
Annot PREDICTED: probable WRKY transcription factor 3 [Setaria italica]
IRGSP Os01t0826400-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 112 183 4e-25 209.4 18.1 21.1
Subject 555 221 292
Annot
Sbicolor Sobic.007G077500.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 1 190 2e-60 171.7 46.8 54.3
Subject 455 256 445
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00112.1.g00480.1.sm.mk length: 265 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 1.9e-26 109-169
HMMPfam PF03106 WRKY 1.7e-29 112-168
HMMSmart SM00774 DNA 1e-34 110-168
ProfileScan PS50811 WRKY 22.905 112-169
superfamily SSF118290 WRKY 8.2e-24 101-170
no_ID  
HMMPanther PTHR31221 FAMILY 3.3e-35 112-169
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00112.1 maker_non_over exon 368986 369192 . + . ID=Zjn_sc00112.1.g00480.1.sm.mk:exon:1
Zjn_sc00112.1 maker_non_over exon 369380 369879 . + . ID=Zjn_sc00112.1.g00480.1.sm.mk:exon:2
Zjn_sc00112.1 maker_non_over exon 370797 370887 . + . ID=Zjn_sc00112.1.g00480.1.sm.mk:exon:3

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