Z. japonica Nagirizaki
Zjn_sc00112.1.g00430.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G11720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 997 796 981 9e-82 104.5 13.8 15.8
Subject 1042 774 959
Annot | Symbols: ATSS3, SS3 | starch synthase 3 | chr1:3952460-3956840 FORWARD LENGTH=1042
NR gb|AKO22327.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 997 796 981 8e-96 168 16 17.5
Subject 1675 1406 1591
Annot starch synthase III [Zea mays]
IRGSP Os04t0624600-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 997 785 981 5e-94 122 16.1 17.3
Subject 1216 933 1132
Annot
Sbicolor Sobic.007G068200.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 997 796 981 8e-98 168.9 16.2 17.3
Subject 1684 1415 1600
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00112.1.g00430.1.sm.mk length: 997 aa.
IPR001296 Glycosyl transferase, family 1
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 1e-06 864-983
IPR005085 Carbohydrate binding module family 25
Molecular Function GO:2001070 starch binding    
HMMPfam PF03423 CBM_25 1.7e-22 622-700
HMMSmart SM01066 Carbohydrate 1.8e-10 621-702
no_ID  
Coil coil coiled-coil NA 712-750
Gene3D G3DSA:3.40.50.2000 no description 1.9e-54 826-982
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 1e-74 796-981
HMMPanther PTHR12526:SF17 STARCH 1e-74 796-981
Seg seg seg NA 198-210
721-753
852-865
882-896
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 2.3e-47 796-981
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00112.1 maker_non_over exon 332038 332139 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:1
Zjn_sc00112.1 maker_non_over exon 333137 333177 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:2
Zjn_sc00112.1 maker_non_over exon 333272 334364 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:3
Zjn_sc00112.1 maker_non_over exon 334503 334687 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:4
Zjn_sc00112.1 maker_non_over exon 334841 334889 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:5
Zjn_sc00112.1 maker_non_over exon 334935 335099 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:6
Zjn_sc00112.1 maker_non_over exon 335299 335394 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:7
Zjn_sc00112.1 maker_non_over exon 335560 335687 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:8
Zjn_sc00112.1 maker_non_over exon 335813 335946 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:9
Zjn_sc00112.1 maker_non_over exon 336089 336303 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:10
Zjn_sc00112.1 maker_non_over exon 336566 336688 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:11
Zjn_sc00112.1 maker_non_over exon 337792 337845 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:12
Zjn_sc00112.1 maker_non_over exon 340355 340483 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:13
Zjn_sc00112.1 maker_non_over exon 340769 340951 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:14
Zjn_sc00112.1 maker_non_over exon 341077 341208 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:15
Zjn_sc00112.1 maker_non_over exon 341288 341452 . + . ID=Zjn_sc00112.1.g00430.1.sm.mk:exon:16

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