Z. japonica Nagirizaki
Zjn_sc00111.1.g00200.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G16770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 240 1 220 2e-25 103.3 34.6 47.5
Subject 248 1 243
Annot | Symbols: RAP2.3, ATEBP, ERF72, EBP | ethylene-responsive element binding protein | chr3:5705784-5706768 FORWARD LENGTH=248
NR ref|XP_004962330.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 240 1 219 1e-43 80.4 51.3 57.9
Subject 193 1 189
Annot PREDICTED: ethylene-responsive transcription factor ERF071-like [Setaria italica]
IRGSP Os05t0361700-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 240 1 202 2e-32 82.5 40.4 47.1
Subject 198 1 179
Annot
Sbicolor Sobic.009G111200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 240 1 216 1e-34 82.9 53.8 59.2
Subject 199 1 192
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00111.1.g00200.1.am.mk length: 240 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 4.4e-06 70-81
92-108
Gene3D G3DSA:3.30.730.10 no description 8.1e-27 74-126
HMMPfam PF00847 AP2 1.6e-14 74-119
HMMSmart SM00380 DNA-binding 1.3e-27 74-132
ProfileScan PS51032 AP2_ERF 22.563 68-126
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 7.7e-20 74-129
no_ID  
HMMPanther PTHR31190 FAMILY 3e-25 74-154
HMMPanther PTHR31190:SF0 SUBFAMILY 3e-25 74-154
Seg seg seg NA 19-58
65-83
130-141
148-185
Pseudomolecule
Chromosome Start End Strand
1756034785604800-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00111.1 maker_non_over exon 173168 173288 . + . ID=Zjn_sc00111.1.g00200.1.am.mk:exon:1
Zjn_sc00111.1 maker_non_over exon 173864 174389 . + . ID=Zjn_sc00111.1.g00200.1.am.mk:exon:2
Zjn_sc00111.1 maker_non_over exon 174415 174490 . + . ID=Zjn_sc00111.1.g00200.1.am.mk:exon:3

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