Z. japonica Nagirizaki
Zjn_sc00110.1.g00630.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G24630.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 774 1 774 0.0 89.1 64.6 74.3
Subject 690 1 690
Annot | Symbols: ATCSLC08, CSLC08, ATCSLC8 | Glycosyl transferase family 2 protein | chr2:10471558-10473984 REVERSE LENGTH=690
NR gb|AFW60933.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 774 1 774 0.0 98.7 87.6 91.7
Subject 764 1 764
Annot hypothetical protein ZEAMMB73_880168 [Zea mays]
IRGSP Os08t0253800-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 774 275 774 0.0 61.9 55.8 58.3
Subject 479 1 479
Annot
Sbicolor Sobic.007G090600.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 774 1 774 0.0 98.2 85.8 90.7
Subject 760 1 760
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00110.1.g00630.1.am.mk length: 774 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 7.9e-15 269-539
HMMPanther PTHR32044 FAMILY 0 60-774
HMMPanther PTHR32044:SF0 SUBFAMILY 0 60-774
HMMPfam PF13641 Glyco_tranf_2_3 1.3e-29 270-518
Seg seg seg NA 104-123
650-667
688-710
711-722
729-746
superfamily SSF53448 Nucleotide-diphospho-sugar 1.2e-39 265-588
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00110.1 maker_non_over exon 585609 586322 . - . ID=Zjn_sc00110.1.g00630.1.am.mk:exon:5
Zjn_sc00110.1 maker_non_over exon 586437 586550 . - . ID=Zjn_sc00110.1.g00630.1.am.mk:exon:4
Zjn_sc00110.1 maker_non_over exon 586648 586938 . - . ID=Zjn_sc00110.1.g00630.1.am.mk:exon:3
Zjn_sc00110.1 maker_non_over exon 587351 587710 . - . ID=Zjn_sc00110.1.g00630.1.am.mk:exon:2
Zjn_sc00110.1 maker_non_over exon 587799 588644 . - . ID=Zjn_sc00110.1.g00630.1.am.mk:exon:1

Top