Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00108.1.g00740.1.sm.mk

Sequence

	Init: Term: reverse complement

BLAST

TAIR10	AT3G54700.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	538	5	522	0.0	99.4	73.4	83.1
		Subject	535	3	519
		Annot	\| Symbols: PHT1;7 \| phosphate transporter 1;7 \| chr3:20248463-20250070 REVERSE LENGTH=535
NR	ref\|XP_002464558.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	538	1	537	0.0	100.6	89.6	94.6
		Subject	541	1	540
		Annot	hypothetical protein SORBIDRAFT_01g020570 [Sorghum bicolor] gi\|241918412\|gb\|EER91556.1\| hypothetical protein SORBIDRAFT_01g020570 [Sorghum bicolor]
IRGSP	Os10t0444700-02_chr10_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	538	6	522	0.0	100.6	87.2	91.8
		Subject	541	8	525
		Annot
Sbicolor	Sobic.001G234800.1.p\|Chr01\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	538	1	537	0.0	100.6	89.6	94.6
		Subject	541	1	540
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR004738	Phosphate permease
Zjn_sc00108.1.g00740.1.sm.mk				length: 538 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005315	inorganic phosphate transmembrane transporter activity
Biological Process	GO:0006817	phosphate ion transport
Cellular Component	GO:0016021	integral to membrane
HMMTigr	TIGR00887	2A0109:	6e-223	13-516
IPR005828	General substrate transporter
Cellular Component	GO:0016021	integral to membrane
Molecular Function	GO:0022857	transmembrane transporter activity
Biological Process	GO:0055085	transmembrane transport
HMMPfam	PF00083	Sugar_tr	4.8e-45	28-514
IPR016196	Major facilitator superfamily domain, general substrate transporter
superfamily	SSF103473	MFS	3.9e-59	1-519
IPR020846	Major facilitator superfamily domain
ProfileScan	PS50850	MFS	31.646	26-507
no_ID
Gene3D	G3DSA:1.20.1250.20	no description	1.9e-11	27-239 352-513
HMMPanther	PTHR24064	FAMILY	1.3e-241	6-522
HMMPanther	PTHR24064:SF0	SUBFAMILY	1.3e-241	6-522
Seg	seg	seg	NA	70-79 246-257 444-461 509-530

Pseudomolecule

No data.

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00108.1	maker_non_over	exon	569580	571196	.	-	.	ID=Zjn_sc00108.1.g00740.1.sm.mk:exon:1