Z. japonica Nagirizaki
Zjn_sc00108.1.g00620.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT5G17660.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
43 |
180 |
6e-16 |
172.4 |
26.5 |
43.6 |
| Subject |
312 |
161 |
305 |
|
| Annot |
| Symbols: | tRNA (guanine-N-7) methyltransferase | chr5:5818778-5820811 REVERSE LENGTH=312 |
| NR |
gb|EEC67040.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
50 |
181 |
9e-57 |
392.3 |
61.3 |
68 |
| Subject |
710 |
571 |
710 |
|
| Annot |
hypothetical protein OsI_33779 [Oryza sativa Indica Group] |
| IRGSP |
Os10t0442100-00_chr10_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
50 |
181 |
3e-59 |
335.9 |
60.8 |
68 |
| Subject |
608 |
469 |
608 |
|
| Annot |
|
| Sbicolor |
Sobic.001G236800.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
57 |
181 |
1e-56 |
358.6 |
56.9 |
64.6 |
| Subject |
649 |
522 |
649 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00108.1.g00620.1.sm.mk |
length: 181 aa. |
| IPR001576 |
Phosphoglycerate kinase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004618 |
phosphoglycerate kinase activity |
|
|
| Biological Process |
GO:0006096 |
glycolysis |
|
|
| HMMPfam |
PF00162 |
PGK |
4.2e-06 |
4-47 |
| superfamily |
SSF53748 |
Phosphoglycerate |
7.9e-06 |
5-46 |
| IPR003358 |
tRNA (guanine-N-7) methyltransferase |
| Biological Process |
GO:0006400 |
tRNA modification |
|
|
| Molecular Function |
GO:0008176 |
tRNA (guanine-N7-)-methyltransferase activity |
|
|
| HMMPfam |
PF02390 |
Methyltransf_4 |
7e-05 |
58-180 |
| IPR015824 |
Phosphoglycerate kinase, N-terminal |
| Molecular Function |
GO:0004618 |
phosphoglycerate kinase activity |
|
|
| Biological Process |
GO:0006096 |
glycolysis |
|
|
| Gene3D |
G3DSA:3.40.50.1260 |
no description |
0.00083 |
4-47 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00108.1 |
maker_non_over |
exon |
497316 |
497504 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:6 |
| Zjn_sc00108.1 |
maker_non_over |
exon |
497633 |
497731 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:5 |
| Zjn_sc00108.1 |
maker_non_over |
exon |
497822 |
497906 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:4 |
| Zjn_sc00108.1 |
maker_non_over |
exon |
501578 |
501621 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:3 |
| Zjn_sc00108.1 |
maker_non_over |
exon |
502416 |
502534 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:2 |
| Zjn_sc00108.1 |
maker_non_over |
exon |
505345 |
505354 |
. |
- |
. |
ID=Zjn_sc00108.1.g00620.1.sm.mk:exon:1 |