Z. japonica Nagirizaki
Zjn_sc00106.1.g01960.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G19230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1113 128 561 e-124 83.2 22.2 26.7
Subject 926 32 449
Annot | Symbols: | Riboflavin synthase-like superfamily protein | chr1:6644189-6649149 FORWARD LENGTH=926
NR ref|NP_001061956.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1113 84 1113 0.0 92.8 61.4 67.5
Subject 1033 11 1033
Annot Os08g0453700 [Oryza sativa Japonica Group] gi|113623925|dbj|BAF23870.1| Os08g0453700 [Oryza sativa Japonica Group]
IRGSP Os09t0438000-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1113 644 1113 e-170 90.5 28.1 31.5
Subject 1007 510 1007
Annot
Sbicolor Sobic.007G148300.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1113 644 1113 0.0 90.6 30.6 33.4
Subject 1008 516 1008
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00106.1.g01960.1.am.mk length: 1113 aa.
IPR000778 Cytochrome b245, heavy chain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00466 GP91PHOX 1.2e-19 651-669
753-773
930-943
953-970
1073-1091
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
ProfileScan PS50222 EF_HAND_2 11.361 338-373
IPR011992 EF-hand domain pair
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.1e-11 271-414
IPR013112 FAD-binding 8
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08022 FAD_binding_8 1.4e-14 867-941
IPR013121 Ferric reductase, NAD binding
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08030 NAD_binding_6 1.8e-28 948-1076
IPR013130 Ferric reductase transmembrane component-like domain
HMMPfam PF01794 Ferric_reduct 4.7e-08 642-771
IPR013623 NADPH oxidase Respiratory burst
Molecular Function GO:0004601 peroxidase activity    
Molecular Function GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08414 NADPH_Ox 1e-36 237-341
no_ID  
Coil coil coiled-coil NA 369-390
Gene3D G3DSA:3.40.50.80 no description 1e-10 1008-1110
HMMPanther PTHR11972 NADPH 0 105-1113
HMMPanther PTHR11972:SF5 RESPIRATORY 0 105-1113
Seg seg seg NA 127-131
141-157
162-173
198-211
221-240
455-472
563-582
729-749
762-779
superfamily SSF47473 EF-hand 1.7e-18 246-428
superfamily SSF52343 Ferredoxin 4.1e-13 944-1113
Pseudomolecule
Chromosome Start End Strand
1392629649271275+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00106.1 maker_non_over exon 941829 941938 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:16
Zjn_sc00106.1 maker_non_over exon 942281 942383 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:15
Zjn_sc00106.1 maker_non_over exon 942467 942652 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:14
Zjn_sc00106.1 maker_non_over exon 942744 942903 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:13
Zjn_sc00106.1 maker_non_over exon 942998 943168 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:12
Zjn_sc00106.1 maker_non_over exon 944928 945084 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:11
Zjn_sc00106.1 maker_non_over exon 945161 945254 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:10
Zjn_sc00106.1 maker_non_over exon 945765 946178 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:9
Zjn_sc00106.1 maker_non_over exon 946325 946588 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:8
Zjn_sc00106.1 maker_non_over exon 946660 947133 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:7
Zjn_sc00106.1 maker_non_over exon 947217 947330 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:6
Zjn_sc00106.1 maker_non_over exon 947485 947533 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:5
Zjn_sc00106.1 maker_non_over exon 947699 947858 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:4
Zjn_sc00106.1 maker_non_over exon 947953 948590 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:3
Zjn_sc00106.1 maker_non_over exon 948677 948845 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:2
Zjn_sc00106.1 maker_non_over exon 950062 950140 . - . ID=Zjn_sc00106.1.g01960.1.am.mk:exon:1

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