Z. japonica Nagirizaki
Zjn_sc00105.1.g00590.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G17920.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
766 |
1 |
766 |
0.0 |
99.9 |
87.2 |
93.6 |
| Subject |
765 |
1 |
765 |
|
| Annot |
| Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765 |
| NR |
ref|NP_001067314.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
766 |
1 |
766 |
0.0 |
100 |
95.6 |
98 |
| Subject |
766 |
1 |
766 |
|
| Annot |
Os12g0624000 [Oryza sativa Japonica Group] gi|122203087|sp|Q2QLY4.1|METE2_ORYSJ RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2; AltName: Full=Cobalamin-independent methionine synthase 2 gi|77556632|gb|ABA99428.1| 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, putative, expressed [Oryza sativa Japonica Group] gi|77556633|gb|ABA99429.1| 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, putative, expressed [Oryza sativa Japonica Group] gi|113649821|dbj|BAF30333.1| Os12g0624000 [Oryza sativa Japonica Group] gi|215695374|dbj|BAG90565.1| unnamed protein product [Oryza sativa Japonica Group] gi|218187282|gb|EEC69709.1| hypothetical protein OsI_39180 [Oryza sativa Indica Group] gi|222617511|gb|EEE53643.1| hypothetical protein OsJ_36927 [Oryza sativa Japonica Group] gi|385717666|gb|AFI71268.1| 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase [Oryza sativa Japonica Group] |
| IRGSP |
Os12t0624000-02_chr12_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
766 |
1 |
766 |
0.0 |
100 |
95.6 |
98 |
| Subject |
766 |
1 |
766 |
|
| Annot |
|
| Sbicolor |
Sobic.008G178800.1.p|Chr08|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
766 |
1 |
766 |
0.0 |
100 |
94.8 |
98.3 |
| Subject |
766 |
1 |
766 |
|
| Annot |
|
InterProScan
No data.
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 16 | 7741941 | 7747300 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00105.1 |
maker |
exon |
309689 |
310322 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:13 |
| Zjn_sc00105.1 |
maker |
exon |
310402 |
310530 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:12 |
| Zjn_sc00105.1 |
maker |
exon |
310632 |
310955 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:11 |
| Zjn_sc00105.1 |
maker |
exon |
311101 |
311206 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:10 |
| Zjn_sc00105.1 |
maker |
exon |
311279 |
311445 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:9 |
| Zjn_sc00105.1 |
maker |
exon |
311525 |
311605 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:8 |
| Zjn_sc00105.1 |
maker |
exon |
311721 |
311884 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:7 |
| Zjn_sc00105.1 |
maker |
exon |
311971 |
312173 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:6 |
| Zjn_sc00105.1 |
maker |
exon |
312263 |
312454 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:5 |
| Zjn_sc00105.1 |
maker |
exon |
312532 |
312659 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:4 |
| Zjn_sc00105.1 |
maker |
exon |
313075 |
313162 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:3 |
| Zjn_sc00105.1 |
maker |
exon |
313252 |
313605 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:2 |
| Zjn_sc00105.1 |
maker |
exon |
314971 |
315048 |
. |
- |
. |
ID=Zjn_sc00105.1.g00590.1.sm.mkhc:exon:1 |