Z. japonica Nagirizaki
Zjn_sc00103.1.g01080.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR gb|ABF96143.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 471 30 434 4e-23 93.4 28 39.7
Subject 440 19 440
Annot F-box domain containing protein [Oryza sativa Japonica Group]
IRGSP Os10t0396100-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 471 29 418 5e-26 90.2 24.6 39.1
Subject 425 10 402
Annot
Sbicolor No_hits

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00103.1.g01080.1.am.mk length: 471 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 0.00036 30-70
ProfileScan PS50181 FBOX 8.968 24-70
superfamily SSF81383 F-box 9.2e-14 17-89
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.9e-08 25-63
HMMPfam PF12937 F-box-like 4.3e-07 28-64
Seg seg seg NA 72-84
115-126
168-184
349-363
Pseudomolecule
Chromosome Start End Strand
21103835111039883+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00103.1 maker_non_over exon 902447 903394 . + . ID=Zjn_sc00103.1.g01080.1.am.mk:exon:1
Zjn_sc00103.1 maker_non_over exon 903441 903827 . + . ID=Zjn_sc00103.1.g01080.1.am.mk:exon:2
Zjn_sc00103.1 maker_non_over exon 903899 903979 . + . ID=Zjn_sc00103.1.g01080.1.am.mk:exon:3

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