Z. japonica Nagirizaki
Zjn_sc00100.1.g00500.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G26945.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 204 97 170 6e-24 46.1 25.5 32.4
Subject 94 19 92
Annot | Symbols: KDR | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:9351571-9352474 FORWARD LENGTH=94
NR ref|XP_004983143.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 204 95 171 3e-31 46.1 35.3 36.8
Subject 94 18 94
Annot PREDICTED: transcription factor ILI7 [Setaria italica]
IRGSP Os10t0404300-00_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 204 95 171 5e-31 44.6 31.9 35.3
Subject 91 15 91
Annot
Sbicolor Sobic.001G488600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 204 95 171 5e-29 45.1 30.4 35.8
Subject 92 16 92
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00100.1.g00500.1.am.mk length: 204 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 6.7e-05 98-152
ProfileScan PS50888 BHLH 9.655 84-138
superfamily SSF47459 HLH, 1.8e-06 98-171
no_ID  
Coil coil coiled-coil NA 135-156
Seg seg seg NA 74-94
172-193
Pseudomolecule
Chromosome Start End Strand
81159429811598937-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00100.1 maker_non_over exon 502466 502632 . + . ID=Zjn_sc00100.1.g00500.1.am.mk:exon:1
Zjn_sc00100.1 maker_non_over exon 503673 503868 . + . ID=Zjn_sc00100.1.g00500.1.am.mk:exon:2
Zjn_sc00100.1 maker_non_over exon 504029 504177 . + . ID=Zjn_sc00100.1.g00500.1.am.mk:exon:3
Zjn_sc00100.1 maker_non_over exon 507003 507105 . + . ID=Zjn_sc00100.1.g00500.1.am.mk:exon:4

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