Z. japonica Nagirizaki
Zjn_sc00097.1.g00660.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 1 229 6e-71 110.2 54.3 61.7
Subject 282 1 233
Annot | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282
NR ref|XP_004977235.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 1 256 2e-85 97.7 68 75.8
Subject 250 1 249
Annot PREDICTED: myb-related protein Zm38-like [Setaria italica]
IRGSP Os11t0180900-00_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 1 256 7e-76 115.2 62.1 71.1
Subject 295 1 265
Annot
Sbicolor Sobic.003G373000.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 1 252 2e-73 105.1 57.4 68.8
Subject 269 1 248
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00097.1.g00660.1.am.mk length: 256 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 2.3e-15 14-61
67-111
HMMSmart SM00717 SANT 4.3e-17 13-63
66-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.6e-27 5-64
65-116
superfamily SSF46689 Homeodomain-like 5.3e-27 14-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 17.175 62-116
9-61
no_ID  
HMMPanther PTHR10641 MYB-LIKE 7.5e-104 1-235
HMMPanther PTHR10641:SF203SUBFAMILY NOT 7.5e-104 1-235
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00097.1 maker_non_over exon 398525 399032 . - . ID=Zjn_sc00097.1.g00660.1.am.mk:exon:2
Zjn_sc00097.1 maker_non_over exon 399120 399382 . - . ID=Zjn_sc00097.1.g00660.1.am.mk:exon:1

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