Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00097.1.g00200.1.am.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00097.1)

BLAST

TAIR10	AT1G21430.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	242	3	181	2e-54	161.6	40.9	57
		Subject	391	6	205
		Annot	\| Symbols: YUC11 \| Flavin-binding monooxygenase family protein \| chr1:7500845-7502186 FORWARD LENGTH=391
NR	ref\|XP_004978296.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	242	1	182	1e-77	159.1	59.5	66.9
		Subject	385	1	204
		Annot	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA11 [Setaria italica]
IRGSP	Os12t0189500-00_chr12_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	242	1	182	1e-74	173.1	53.7	64.5
		Subject	419	36	239
		Annot
Sbicolor	Sobic.008G064100.1.p\|Chr08\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	242	1	182	3e-77	159.1	58.3	64.9
		Subject	385	24	227
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
Zjn_sc00097.1.g00200.1.am.mk				length: 242 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0016491	oxidoreductase activity
Biological Process	GO:0055114	oxidation-reduction process
FPrintScan	PR00469	PNDRDTASEII	6.8e-11	5-27 108-116 147-171
IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Biological Process	GO:0055114	oxidation-reduction process
FPrintScan	PR00368	FADPNR	1.4e-07	6-25 151-169
no_ID
Gene3D	G3DSA:3.50.50.60	no description	3.1e-36	1-183
HMMPanther	PTHR23023	DIMETHYLANILINE	1.1e-71	6-182
HMMPanther	PTHR23023:SF5	MONOOXYGENASE	1.1e-71	6-182
HMMPfam	PF13738	Pyr_redox_3	9.8e-13	7-53 82-182
ProfileScan	PS51257	PROKAR_LIPOPROTEIN	5.000	1-21
superfamily	SSF51905	FAD/NAD(P)-binding	3e-35	1-191

Pseudomolecule

No data.

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00097.1	maker_non_over	exon	173072	173313	.	+	.	ID=Zjn_sc00097.1.g00200.1.am.mk:exon:1
Zjn_sc00097.1	maker_non_over	exon	173380	173683	.	+	.	ID=Zjn_sc00097.1.g00200.1.am.mk:exon:2
Zjn_sc00097.1	maker_non_over	exon	174564	174746	.	+	.	ID=Zjn_sc00097.1.g00200.1.am.mk:exon:3