Z. japonica Nagirizaki
Zjn_sc00094.1.g00930.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G68050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 624 51 622 0.0 99.2 67.8 77.9
Subject 619 55 618
Annot | Symbols: ADO3, FKF1 | flavin-binding, kelch repeat, f box 1 | chr1:25508737-25510697 FORWARD LENGTH=619
NR gb|AGT17226.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 624 1 623 0.0 98.2 89.7 92.5
Subject 613 1 613
Annot hypothetical protein SHCRBa_268_K21_R_240 [Saccharum hybrid cultivar R570]
IRGSP Os11t0547000-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 624 36 623 0.0 101 84.6 88
Subject 630 42 630
Annot
Sbicolor Sobic.005G145300.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 624 1 624 0.0 100.3 89.1 93.1
Subject 626 1 626
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00094.1.g00930.1.sm.mk length: 624 aa.
IPR000014 PAS domain
method AccNumber shortName E-value location
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
HMMPfam PF13426 PAS_9 1.8e-10 51-166
superfamily SSF55785 PYP-like 2.8e-14 47-168
IPR001810 F-box domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2e-06 216-258
superfamily SSF81383 F-box 5.3e-10 206-273
IPR011043 Galactose oxidase/kelch, beta-propeller
superfamily SSF50965 Galactose 2.9e-37 293-611
IPR011498 Kelch repeat type 2
Molecular Function GO:0005515 protein binding    
HMMPfam PF07646 Kelch_2 3.6e-05 528-575
IPR015915 Kelch-type beta propeller
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.120.10.80 no description 3.5e-34 293-488
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 5.1e-07 509-608
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 3.3e-07 211-256
Gene3D G3DSA:3.30.450.20 no description 1.8e-18 51-167
HMMPanther PTHR23244 KELCH 0 57-615
HMMPanther PTHR23244:SF9 ADAGIO 0 57-615
HMMPfam PF13418 Kelch_4 5.7e-11 309-360
413-461
Seg seg seg NA 19-35
49-61
588-602
Pseudomolecule
Chromosome Start End Strand
1065810576584172-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00094.1 maker_non_over exon 769003 770580 . - . ID=Zjn_sc00094.1.g00930.1.sm.mk:exon:3
Zjn_sc00094.1 maker_non_over exon 771279 771332 . - . ID=Zjn_sc00094.1.g00930.1.sm.mk:exon:2
Zjn_sc00094.1 maker_non_over exon 771876 772118 . - . ID=Zjn_sc00094.1.g00930.1.sm.mk:exon:1

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