Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00094.1.g00800.1.am.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00094.1)

BLAST

TAIR10	AT2G22900.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	603	147	547	e-100	74.5	31.5	41
		Subject	449	34	446
		Annot	\| Symbols: \| Galactosyl transferase GMA12/MNN10 family protein \| chr2:9744359-9746193 REVERSE LENGTH=449
NR	ref\|NP_001152534.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	603	169	547	e-154	78.4	48.8	53.4
		Subject	473	58	471
		Annot	glycosyltransferase 6 [Zea mays] gi\|195657233\|gb\|ACG48084.1\| glycosyltransferase 6 [Zea mays]
IRGSP	Os11t0546500-00_chr11_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	603	165	547	e-136	80.1	43.9	49.1
		Subject	483	59	481
		Annot
Sbicolor	Sobic.005G144000.1.p\|Chr05\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	603	136	547	e-148	74.5	45.9	51.7
		Subject	449	13	443
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR008630	Galactosyl transferase
Zjn_sc00094.1.g00800.1.am.mk				length: 603 aa.
method	AccNumber	shortName	E-value	location
Cellular Component	GO:0016021	integral to membrane
Molecular Function	GO:0016758	transferase activity, transferring hexosyl groups
HMMPfam	PF05637	Glyco_transf_34	5.6e-50	251-496
no_ID
HMMPanther	PTHR31311	FAMILY	3.2e-134	153-568
Seg	seg	seg	NA	150-168 179-189 239-251 353-364 448-460

Pseudomolecule

Chromosome	Start	End	Strand
10	6427060	6429800	-

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00094.1	maker_non_over	exon	615006	615177	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:8
Zjn_sc00094.1	maker_non_over	exon	615791	616037	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:7
Zjn_sc00094.1	maker_non_over	exon	616061	616074	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:6
Zjn_sc00094.1	maker_non_over	exon	616237	616802	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:5
Zjn_sc00094.1	maker_non_over	exon	616836	616894	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:4
Zjn_sc00094.1	maker_non_over	exon	616928	617242	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:3
Zjn_sc00094.1	maker_non_over	exon	617282	617387	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:2
Zjn_sc00094.1	maker_non_over	exon	617414	617746	.	-	.	ID=Zjn_sc00094.1.g00800.1.am.mk:exon:1