Z. japonica Nagirizaki
Zjn_sc00090.1.g01270.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G08550.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 191 303 1e-31 152.5 26.1 31.7
Subject 462 350 462
Annot | Symbols: NPQ1, AVDE1 | non-photochemical quenching 1 | chr1:2707462-2709387 FORWARD LENGTH=462
NR gb|AAL09678.1|AF411133_1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 191 303 1e-39 147.2 31.7 35.6
Subject 446 334 446
Annot violaxanthin de-epoxidase precursor [Oryza sativa Japonica Group] gi|19033168|gb|AAL83562.1|AF468689_1 violaxanthin de-epoxidase [Oryza sativa Japonica Group]
IRGSP Os04t0379700-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 191 303 3e-42 80.2 31.7 35.6
Subject 243 131 243
Annot
Sbicolor Sobic.006G049200.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 191 303 3e-41 147.2 32.7 35
Subject 446 338 446
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00090.1.g01270.1.am.mk length: 303 aa.
IPR010788 Violaxanthin de-epoxidase
method AccNumber shortName E-value location
Cellular Component GO:0009507 chloroplast    
Molecular Function GO:0046422 violaxanthin de-epoxidase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07137 VDE 1.4e-07 187-213
no_ID  
Coil coil coiled-coil NA 225-246
Seg seg seg NA 39-51
106-120
224-246
274-285
Pseudomolecule
Chromosome Start End Strand
1134661693468691-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00090.1 maker_non_over exon 766540 766632 . + . ID=Zjn_sc00090.1.g01270.1.am.mk:exon:1
Zjn_sc00090.1 maker_non_over exon 766662 766804 . + . ID=Zjn_sc00090.1.g01270.1.am.mk:exon:2
Zjn_sc00090.1 maker_non_over exon 766977 767178 . + . ID=Zjn_sc00090.1.g01270.1.am.mk:exon:3
Zjn_sc00090.1 maker_non_over exon 767297 767426 . + . ID=Zjn_sc00090.1.g01270.1.am.mk:exon:4
Zjn_sc00090.1 maker_non_over exon 768719 769062 . + . ID=Zjn_sc00090.1.g01270.1.am.mk:exon:5

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