Z. japonica Nagirizaki
Zjn_sc00090.1.g00710.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G55410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 889 386 885 0.0 114.4 46.9 52.9
Subject 1017 517 1016
Annot | Symbols: | 2-oxoglutarate dehydrogenase, E1 component | chr3:20541897-20545728 FORWARD LENGTH=1017
NR ref|XP_002446307.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 889 386 889 0.0 115.3 55 56
Subject 1025 522 1025
Annot hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor] gi|241937490|gb|EES10635.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor]
IRGSP Os04t0390000-02_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 889 386 889 0.0 114.3 53.5 55.5
Subject 1016 513 1016
Annot
Sbicolor Sobic.006G052800.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 889 386 889 0.0 115.3 55 56
Subject 1025 522 1025
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00090.1.g00710.1.sm.mk length: 889 aa.
IPR001017 Dehydrogenase, E1 component
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor    
HMMPfam PF00676 E1_dh 4.1e-10 240-389
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 6.6e-66 503-718
HMMSmart SM00861 Transketolase, 1.5e-54 504-717
IPR011603 2-oxoglutarate dehydrogenase, E1 component
Molecular Function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity    
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0030976 thiamine pyrophosphate binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000157 2-oxoglutarate 0 37-883
HMMPanther PTHR23152 2-OXOGLUTARATE 0 14-884
no_ID  
Gene3D G3DSA:3.40.50.970 no description 8e-18 191-385
568-719
HMMPanther PTHR23152:SF0 SUBFAMILY 0 14-884
superfamily SSF52518 Thiamin 7.5e-06 485-725
139-386
387-481
Pseudomolecule
Chromosome Start End Strand
1137986863805164+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00090.1 maker_non_over exon 430067 430305 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:9
Zjn_sc00090.1 maker_non_over exon 431204 431327 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:8
Zjn_sc00090.1 maker_non_over exon 431428 431643 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:7
Zjn_sc00090.1 maker_non_over exon 431723 431851 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:6
Zjn_sc00090.1 maker_non_over exon 432316 432562 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:5
Zjn_sc00090.1 maker_non_over exon 433523 433855 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:4
Zjn_sc00090.1 maker_non_over exon 433983 434209 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:3
Zjn_sc00090.1 maker_non_over exon 435271 435455 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:2
Zjn_sc00090.1 maker_non_over exon 435576 436545 . - . ID=Zjn_sc00090.1.g00710.1.sm.mk:exon:1

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