Z. japonica Nagirizaki
Zjn_sc00089.1.g00450.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G23960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 574 93 574 2e-64 95.3 26.5 47.2
Subject 547 34 545
Annot | Symbols: ATTPS21, TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=547
NR ref|XP_004972882.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 574 58 574 0.0 94.9 62.9 75.1
Subject 545 10 545
Annot PREDICTED: (E)-beta-farnesene synthase-like [Setaria italica]
IRGSP Os08t0139700-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 574 90 574 e-121 90.4 40.9 58.9
Subject 519 1 519
Annot
Sbicolor Sobic.007G035800.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 574 38 574 0.0 99.8 62.5 76.1
Subject 573 1 572
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00089.1.g00450.1.am.mk length: 574 aa.
IPR001906 Terpene synthase, N-terminal domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
Gene3D G3DSA:1.50.30.10 no description 6e-59 93-286
HMMPfam PF01397 Terpene_synth 2.2e-45 75-236
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1.6e-49 277-522
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 1.6e-56 71-272
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 4e-91 292-574
superfamily SSF48576 Terpenoid 1.1e-70 272-574
no_ID  
HMMPanther PTHR31225 FAMILY 5.2e-134 22-574
Seg seg seg NA 2-12
47-57
88-111
250-262
Pseudomolecule
Chromosome Start End Strand
1331426563144964+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00089.1 maker_non_over exon 401070 401601 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:1
Zjn_sc00089.1 maker_non_over exon 401705 402039 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:2
Zjn_sc00089.1 maker_non_over exon 402230 402429 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:3
Zjn_sc00089.1 maker_non_over exon 402523 402646 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:4
Zjn_sc00089.1 maker_non_over exon 402749 403000 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:5
Zjn_sc00089.1 maker_non_over exon 403097 403378 . + . ID=Zjn_sc00089.1.g00450.1.am.mk:exon:6

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