Z. japonica Nagirizaki
Zjn_sc00089.1.g00200.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G31590.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 807 1 710 0.0 85.7 57.2 65.8
Subject 692 1 692
Annot | Symbols: ATCSLC05, CSLC05, ATCSLC5, CSLC5 | Cellulose-synthase-like C5 | chr4:15309889-15312336 REVERSE LENGTH=692
NR gb|AFW60933.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 807 1 710 0.0 94.7 77.7 81.8
Subject 764 1 764
Annot hypothetical protein ZEAMMB73_880168 [Zea mays]
IRGSP Os08t0253800-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 807 256 710 0.0 59.4 51.8 53.5
Subject 479 1 479
Annot
Sbicolor Sobic.007G090600.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 807 1 710 0.0 94.2 76.3 81.4
Subject 760 1 760
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00089.1.g00200.1.am.mk length: 807 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 5e-19 250-503
HMMPanther PTHR32044 FAMILY 0 48-712
HMMPanther PTHR32044:SF0 SUBFAMILY 0 48-712
HMMPfam PF13641 Glyco_tranf_2_3 3e-32 251-482
Seg seg seg NA 94-110
232-247
594-611
633-643
665-682
752-769
786-802
superfamily SSF53448 Nucleotide-diphospho-sugar 1.4e-43 246-520
Pseudomolecule
Chromosome Start End Strand
1329329882938414-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00089.1 maker_non_over exon 191402 191446 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:12
Zjn_sc00089.1 maker_non_over exon 191959 192208 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:11
Zjn_sc00089.1 maker_non_over exon 193370 193374 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:10
Zjn_sc00089.1 maker_non_over exon 193648 194205 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:9
Zjn_sc00089.1 maker_non_over exon 194239 194274 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:8
Zjn_sc00089.1 maker_non_over exon 194302 194328 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:7
Zjn_sc00089.1 maker_non_over exon 194471 194584 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:6
Zjn_sc00089.1 maker_non_over exon 194697 194987 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:5
Zjn_sc00089.1 maker_non_over exon 195545 195853 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:4
Zjn_sc00089.1 maker_non_over exon 195968 196417 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:3
Zjn_sc00089.1 maker_non_over exon 196451 196735 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:2
Zjn_sc00089.1 maker_non_over exon 196775 196828 . - . ID=Zjn_sc00089.1.g00200.1.am.mk:exon:1

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