Z. japonica Nagirizaki
Zjn_sc00088.1.g00050.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT3G63520.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
165 |
1 |
119 |
2e-48 |
326.1 |
57.6 |
62.4 |
| Subject |
538 |
268 |
412 |
|
| Annot |
| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538 |
| NR |
gb|AFW89636.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
165 |
1 |
119 |
3e-56 |
283 |
66.7 |
69.1 |
| Subject |
467 |
193 |
337 |
|
| Annot |
white cap1 [Zea mays] |
| IRGSP |
Os12t0640600-01_chr12_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
165 |
1 |
119 |
9e-59 |
327.3 |
67.9 |
69.1 |
| Subject |
540 |
267 |
411 |
|
| Annot |
|
| Sbicolor |
Sobic.001G509200.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
165 |
1 |
119 |
1e-58 |
332.7 |
66.7 |
69.7 |
| Subject |
549 |
275 |
419 |
|
| Annot |
|
InterProScan
No data.
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 15 | 7645494 | 7647727 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00088.1 |
maker |
exon |
43138 |
43450 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:6 |
| Zjn_sc00088.1 |
maker |
exon |
43548 |
43659 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:5 |
| Zjn_sc00088.1 |
maker |
exon |
44275 |
44376 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:4 |
| Zjn_sc00088.1 |
maker |
exon |
44453 |
44570 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:3 |
| Zjn_sc00088.1 |
maker |
exon |
45050 |
45110 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:2 |
| Zjn_sc00088.1 |
maker |
exon |
45293 |
45371 |
. |
- |
. |
ID=Zjn_sc00088.1.g00050.1.am.mkhc:exon:1 |