Z. japonica Nagirizaki
Zjn_sc00087.1.g00420.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G37740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 220 47 175 4e-43 243.2 38.2 43.6
Subject 535 155 288
Annot | Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535
NR ref|XP_004979454.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 220 6 202 5e-80 164.5 70.5 75
Subject 362 18 218
Annot PREDICTED: growth-regulating factor 8-like [Setaria italica]
IRGSP Os12t0484900-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 220 36 167 3e-49 187.7 45.5 51.4
Subject 413 17 168
Annot
Sbicolor Sobic.005G150900.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 220 12 202 2e-71 168.6 68.6 71.8
Subject 371 22 220
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00087.1.g00420.1.sm.mk length: 220 aa.
IPR014977 WRC
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF08879 WRC 2e-20 115-159
IPR014978 Glutamine-Leucine-Glutamine, QLQ
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMPfam PF08880 QLQ 4e-16 55-91
HMMSmart SM00951 no description 2.8e-12 55-91
no_ID  
HMMPanther PTHR31602 FAMILY 6.3e-65 21-208
Seg seg seg NA 29-45
Pseudomolecule
Chromosome Start End Strand
962126016216056+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00087.1 maker_non_over exon 340343 340397 . - . ID=Zjn_sc00087.1.g00420.1.sm.mk:exon:4
Zjn_sc00087.1 maker_non_over exon 341971 342268 . - . ID=Zjn_sc00087.1.g00420.1.sm.mk:exon:3
Zjn_sc00087.1 maker_non_over exon 342994 343197 . - . ID=Zjn_sc00087.1.g00420.1.sm.mk:exon:2
Zjn_sc00087.1 maker_non_over exon 343693 343798 . - . ID=Zjn_sc00087.1.g00420.1.sm.mk:exon:1

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