Z. japonica Nagirizaki
Zjn_sc00086.1.g03030.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G57660.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 1 295 1e-29 120.3 39.7 50.5
Subject 355 75 355
Annot | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:23355573-23356729 FORWARD LENGTH=355
NR ref|XP_004951711.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 14 295 2e-82 130.8 69.2 74.6
Subject 386 85 386
Annot PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Setaria italica]
IRGSP Os02t0178100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 12 295 6e-68 112.2 59 66.1
Subject 331 69 331
Annot
Sbicolor Sobic.004G063200.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 14 295 2e-64 120.7 55.6 62.7
Subject 356 85 356
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00086.1.g03030.1.am.mk length: 295 aa.
IPR010402 CCT domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 5.2e-20 222-265
ProfileScan PS51017 CCT 16.956 222-264
no_ID  
HMMPanther PTHR31319 FAMILY 3.3e-82 1-295
Seg seg seg NA 1-17
37-48
179-190
207-219
Pseudomolecule
Chromosome Start End Strand
815161101517180+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00086.1 maker_non_over exon 1276673 1276984 . - . ID=Zjn_sc00086.1.g03030.1.am.mk:exon:3
Zjn_sc00086.1 maker_non_over exon 1277087 1277227 . - . ID=Zjn_sc00086.1.g03030.1.am.mk:exon:2
Zjn_sc00086.1 maker_non_over exon 1277309 1277743 . - . ID=Zjn_sc00086.1.g03030.1.am.mk:exon:1

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