Z. japonica Nagirizaki
Zjn_sc00085.1.g00270.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G18180.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 742 359 730 2e-79 63.3 21.4 29.8
Subject 470 103 455
Annot | Symbols: | Glycosyltransferase family 61 protein | chr3:6230270-6231878 FORWARD LENGTH=470
NR ref|XP_004983296.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 742 262 741 e-167 61.9 40.4 48.4
Subject 459 1 457
Annot PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like [Setaria italica]
IRGSP Os06t0311000-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 742 262 741 e-144 65.9 35.8 45.1
Subject 489 1 485
Annot
Sbicolor Sobic.001G263300.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 742 263 741 e-158 62.8 39.9 48
Subject 466 3 464
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00085.1.g00270.1.am.mk length: 742 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13812 PPR_3 0.018 36-66
ProfileScan PS51375 PPR 6.073 34-68
171-208
140-170
105-139
IPR007657 Glycosyltransferase AER61, uncharacterised
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups    
HMMPfam PF04577 DUF563 5.2e-23 456-656
no_ID  
HMMPanther PTHR20961 GLYCOSYLTRANSFERASE 5.8e-127 354-740
HMMPanther PTHR20961:SF0 SUBFAMILY 5.8e-127 354-740
Seg seg seg NA 4-27
43-57
275-287
296-306
417-433
679-686
Pseudomolecule
Chromosome Start End Strand
2035615803567612+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00085.1 maker_non_over exon 226630 227395 . + . ID=Zjn_sc00085.1.g00270.1.am.mk:exon:1
Zjn_sc00085.1 maker_non_over exon 230468 230623 . + . ID=Zjn_sc00085.1.g00270.1.am.mk:exon:2
Zjn_sc00085.1 maker_non_over exon 230860 230926 . + . ID=Zjn_sc00085.1.g00270.1.am.mk:exon:3
Zjn_sc00085.1 maker_non_over exon 231225 231296 . + . ID=Zjn_sc00085.1.g00270.1.am.mk:exon:4
Zjn_sc00085.1 maker_non_over exon 231495 232662 . + . ID=Zjn_sc00085.1.g00270.1.am.mk:exon:5

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