Z. japonica Nagirizaki
Zjn_sc00084.1.g00950.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G34160.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 6 284 2e-36 100.8 28.2 42.1
Subject 376 18 298
Annot | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357903-16359304 FORWARD LENGTH=376
NR ref|XP_002459903.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 2 373 e-115 102.4 76.1 81.8
Subject 382 3 382
Annot hypothetical protein SORBIDRAFT_02g014250 [Sorghum bicolor] gi|241923280|gb|EER96424.1| hypothetical protein SORBIDRAFT_02g014250 [Sorghum bicolor]
IRGSP Os09t0111100-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 368 2e-80 97.6 61.7 69.2
Subject 364 1 361
Annot
Sbicolor Sobic.002G144800.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 2 373 e-118 102.4 76.1 81.8
Subject 382 3 382
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00084.1.g00950.1.sm.mk length: 373 aa.
IPR006671 Cyclin, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00134 Cyclin_N 1.5e-17 73-179
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 3e-18 69-180
HMMSmart SM00385 domain 0.0018 78-173
superfamily SSF47954 Cyclin-like 7.7e-21 73-181
no_ID  
HMMPanther PTHR10177 CYCLINE 8.4e-56 8-367
HMMPanther PTHR10177:SF76 CYCLIN-D 8.4e-56 8-367
Seg seg seg NA 21-34
60-86
91-99
121-131
222-227
311-358
Pseudomolecule
Chromosome Start End Strand
1996305519631903+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00084.1 maker_non_over exon 845297 845930 . + . ID=Zjn_sc00084.1.g00950.1.sm.mk:exon:1
Zjn_sc00084.1 maker_non_over exon 846047 846159 . + . ID=Zjn_sc00084.1.g00950.1.sm.mk:exon:2
Zjn_sc00084.1 maker_non_over exon 846275 846649 . + . ID=Zjn_sc00084.1.g00950.1.sm.mk:exon:3

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