Z. japonica Nagirizaki
Zjn_sc00082.1.g00630.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT1G65480.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
9 |
178 |
1e-69 |
96.7 |
65.7 |
76.2 |
| Subject |
175 |
5 |
174 |
|
| Annot |
| Symbols: FT | PEBP (phosphatidylethanolamine-binding protein) family protein | chr1:24331510-24333689 FORWARD LENGTH=175 |
| NR |
ref|XP_002489297.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
8 |
181 |
5e-94 |
96.1 |
90.6 |
93.4 |
| Subject |
174 |
1 |
174 |
|
| Annot |
hypothetical protein SORBIDRAFT_0010s003120 [Sorghum bicolor] gi|241946945|gb|EES20090.1| hypothetical protein SORBIDRAFT_0010s003120 [Sorghum bicolor] |
| IRGSP |
Os11t0293800-00_chr11_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
8 |
181 |
4e-91 |
105 |
84.5 |
91.2 |
| Subject |
190 |
17 |
190 |
|
| Annot |
|
| Sbicolor |
Sobic.K020800.1.p|super_10|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
181 |
8 |
181 |
1e-96 |
97.8 |
90.6 |
93.4 |
| Subject |
177 |
4 |
177 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00082.1.g00630.1.am.mk |
length: 181 aa. |
| IPR001858 |
Phosphatidylethanolamine-binding, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| PatternScan |
PS01220 |
PBP |
NA |
69-91 |
| IPR008914 |
Phosphatidylethanolamine-binding protein PEBP |
| Gene3D |
G3DSA:3.90.280.10 |
no description |
3.8e-62 |
7-175 |
| HMMPfam |
PF01161 |
PBP |
1.3e-24 |
31-166 |
| superfamily |
SSF49777 |
PEBP-like |
6.7e-55 |
16-172 |
| no_ID |
|
| HMMPanther |
PTHR11362 |
PHOSPHATIDYLETHANOLAMINE-BINDING |
7e-72 |
1-178 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 10 | 4906358 | 4908315 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00082.1 |
maker_non_over |
exon |
893740 |
893969 |
. |
- |
. |
ID=Zjn_sc00082.1.g00630.1.am.mk:exon:5 |
| Zjn_sc00082.1 |
maker_non_over |
exon |
894494 |
894534 |
. |
- |
. |
ID=Zjn_sc00082.1.g00630.1.am.mk:exon:4 |
| Zjn_sc00082.1 |
maker_non_over |
exon |
894709 |
894770 |
. |
- |
. |
ID=Zjn_sc00082.1.g00630.1.am.mk:exon:3 |
| Zjn_sc00082.1 |
maker_non_over |
exon |
895303 |
895486 |
. |
- |
. |
ID=Zjn_sc00082.1.g00630.1.am.mk:exon:2 |
| Zjn_sc00082.1 |
maker_non_over |
exon |
895669 |
895697 |
. |
- |
. |
ID=Zjn_sc00082.1.g00630.1.am.mk:exon:1 |