Z. japonica Nagirizaki
Zjn_sc00081.1.g00670.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 884 4 878 0.0 125.7 71.5 81.9
Subject 1111 6 848
Annot | Symbols: ATCSLD4, CSLD4 | cellulose synthase like D4 | chr4:17910096-17913641 REVERSE LENGTH=1111
NR ref|XP_008664736.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 884 1 878 0.0 129.6 92.4 95.1
Subject 1146 1 887
Annot PREDICTED: cellulose synthase-like protein D3 [Zea mays] gi|414870686|tpg|DAA49243.1| TPA: putative cellulose synthase-like family protein [Zea mays]
IRGSP Os08t0345500-00_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 884 1 878 0.0 129.6 88.7 93.1
Subject 1146 1 886
Annot
Sbicolor Sobic.007G100800.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 884 1 878 0.0 129.9 92.1 94.9
Subject 1148 1 889
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00081.1.g00670.1.sm.mk length: 884 aa.
IPR005150 Cellulose synthase
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016760 cellulose synthase (UDP-forming) activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03552 Cellulose_synt 3.9e-212 371-878
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-14 116-192
no_ID  
HMMPanther PTHR32287 FAMILY 0 140-878
HMMPanther PTHR32287:SF6 SUBFAMILY 0 140-878
HMMPfam PF14570 zf-RING_4 4.1e-13 134-182
Seg seg seg NA 13-28
245-261
386-398
superfamily SSF57850 RING/U-box 6.7e-09 114-210
Pseudomolecule
Chromosome Start End Strand
1353123465315000-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00081.1 maker_non_over exon 914464 917118 . - . ID=Zjn_sc00081.1.g00670.1.sm.mk:exon:1

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