Z. japonica Nagirizaki
Zjn_sc00078.1.g02720.1.am.mk ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 155 6e-69 119.5 49.6 55.9
Subject 282 1 155
Annot | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282
NR ref|XP_004974147.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 236 3e-88 105.5 75.4 81.8
Subject 249 1 249
Annot PREDICTED: myb-related protein Zm38-like [Setaria italica]
IRGSP Os09t0538400-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 236 2e-77 106.4 69.9 78
Subject 251 1 251
Annot
Sbicolor Sobic.007G177100.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 236 3e-88 109.3 75 81.8
Subject 258 1 258
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00078.1.g02720.1.am.mk length: 236 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 3.3e-15 14-61
67-111
HMMSmart SM00717 SANT 1.9e-16 13-63
66-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.9e-26 5-64
65-116
superfamily SSF46689 Homeodomain-like 4.2e-26 14-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 16.979 62-116
9-61
no_ID  
HMMPanther PTHR10641 MYB-LIKE 6.1e-102 1-138
HMMPanther PTHR10641:SF203SUBFAMILY NOT 6.1e-102 1-138
Seg seg seg NA 179-203
Pseudomolecule
Chromosome Start End Strand
131133521811335928-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00078.1 maker_non_over exon 1112115 1112825 . - . ID=Zjn_sc00078.1.g02720.1.am.mk:exon:1

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