Z. japonica Nagirizaki
Zjn_sc00078.1.g01240.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G23820.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 1 404 e-128 108.2 58.8 71.3
Subject 460 1 446
Annot | Symbols: GAE6 | UDP-D-glucuronate 4-epimerase 6 | chr3:8603645-8605027 FORWARD LENGTH=460
NR ref|XP_004973970.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 1 425 0.0 114.1 87.5 91.8
Subject 485 1 482
Annot PREDICTED: UDP-glucuronate 4-epimerase 6-like [Setaria italica]
IRGSP Os08t0526100-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 1 425 0.0 112.5 84.2 90.1
Subject 478 2 475
Annot
Sbicolor Sobic.007G196800.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 1 425 0.0 112.7 87.1 92
Subject 479 1 476
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00078.1.g01240.1.sm.mk length: 425 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 2.6e-38 120-305
IPR008089 Nucleotide sugar epimerase
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives    
FPrintScan PR01713 NUCEPIMERASE 6.6e-18 287-302
323-338
363-380
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 2.3e-40 102-264
no_ID  
Gene3D G3DSA:3.90.25.10 no description 8.2e-16 363-400
HMMPanther PTHR10366 NAD 6.9e-185 107-413
HMMPanther PTHR10366:SF42 UDP-GLUCURONATE 6.9e-185 107-413
Seg seg seg NA 42-60
69-96
307-319
superfamily SSF51735 NAD(P)-binding 1.6e-58 112-403
Pseudomolecule
Chromosome Start End Strand
131073780510739441-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00078.1 maker_non_over exon 514702 515658 . - . ID=Zjn_sc00078.1.g01240.1.sm.mk:exon:2
Zjn_sc00078.1 maker_non_over exon 516018 516338 . - . ID=Zjn_sc00078.1.g01240.1.sm.mk:exon:1

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