Z. japonica Nagirizaki
Zjn_sc00073.1.g00230.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G17660.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
54 |
294 |
2e-88 |
104 |
51.3 |
61.7 |
| Subject |
312 |
70 |
305 |
|
| Annot |
| Symbols: | tRNA (guanine-N-7) methyltransferase | chr5:5818778-5820811 REVERSE LENGTH=312 |
| NR |
ref|XP_004968887.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
19 |
298 |
e-135 |
93.3 |
78 |
83.7 |
| Subject |
280 |
1 |
278 |
|
| Annot |
PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Setaria italica] |
| IRGSP |
Os01t0535900-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
71 |
298 |
e-114 |
80.7 |
64 |
68.7 |
| Subject |
242 |
14 |
240 |
|
| Annot |
|
| Sbicolor |
Sobic.003G182100.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
19 |
298 |
e-134 |
93.3 |
75.3 |
82.7 |
| Subject |
280 |
1 |
278 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00073.1.g00230.1.sm.mkhc |
length: 300 aa. |
| IPR003358 |
tRNA (guanine-N-7) methyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006400 |
tRNA modification |
|
|
| Molecular Function |
GO:0008176 |
tRNA (guanine-N7-)-methyltransferase activity |
|
|
| HMMPfam |
PF02390 |
Methyltransf_4 |
2.1e-32 |
98-294 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.150 |
no description |
2.7e-06 |
113-227 |
| HMMPanther |
PTHR23417 |
3-DEOXY-D-MANNO-OCTULOSONIC-ACID |
2.7e-67 |
38-295 |
| HMMPanther |
PTHR23417:SF1 |
TRNA |
2.7e-67 |
38-295 |
| superfamily |
SSF53335 |
S-adenosyl-L-methionine-dependent |
5.8e-19 |
85-298 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 8759840 | 8763200 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00073.1 |
maker |
exon |
352066 |
352284 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:1 |
| Zjn_sc00073.1 |
maker |
exon |
352365 |
352421 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:2 |
| Zjn_sc00073.1 |
maker |
exon |
352520 |
352595 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:3 |
| Zjn_sc00073.1 |
maker |
exon |
352688 |
352767 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:4 |
| Zjn_sc00073.1 |
maker |
exon |
352874 |
352923 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:5 |
| Zjn_sc00073.1 |
maker |
exon |
353017 |
353101 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:6 |
| Zjn_sc00073.1 |
maker |
exon |
353241 |
353339 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:7 |
| Zjn_sc00073.1 |
maker |
exon |
354743 |
355426 |
. |
+ |
. |
ID=Zjn_sc00073.1.g00230.1.sm.mkhc:exon:8 |