Z. japonica Nagirizaki
Zjn_sc00072.1.g00210.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G18910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 94 324 2e-91 90.5 48.3 59.7
Subject 294 53 290
Annot | Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294
NR ref|XP_002440774.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 34 325 e-140 87.1 77.2 82.2
Subject 283 1 283
Annot hypothetical protein SORBIDRAFT_09g006390 [Sorghum bicolor] gi|241946059|gb|EES19204.1| hypothetical protein SORBIDRAFT_09g006390 [Sorghum bicolor]
IRGSP Os02t0232900-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 44 324 5e-98 87.4 58.2 68.3
Subject 284 12 279
Annot
Sbicolor Sobic.009G075900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 34 325 e-143 87.1 77.2 82.2
Subject 283 1 283
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00072.1.g00210.1.am.mk length: 325 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1e-41 93-112
132-156
169-188
214-232
245-267
282-302
HMMPanther PTHR19139 AQUAPORIN 1.3e-140 71-325
HMMPfam PF00230 MIP 1.2e-54 93-299
HMMTigr TIGR00861 MIP: 4e-55 97-299
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 150-158
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 6.9e-67 94-308
superfamily SSF81338 Aquaporin-like 1.7e-63 82-316
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 1.3e-140 71-325
Seg seg seg NA 235-246
Pseudomolecule
Chromosome Start End Strand
1736729813675558-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00072.1 maker_non_over exon 341808 342018 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:6
Zjn_sc00072.1 maker_non_over exon 342110 342171 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:5
Zjn_sc00072.1 maker_non_over exon 342826 343023 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:4
Zjn_sc00072.1 maker_non_over exon 343124 343381 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:3
Zjn_sc00072.1 maker_non_over exon 343922 344126 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:2
Zjn_sc00072.1 maker_non_over exon 344342 344385 . - . ID=Zjn_sc00072.1.g00210.1.am.mk:exon:1

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