Z. japonica Nagirizaki
Zjn_sc00071.1.g01730.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 594 134 590 e-126 82.5 35.5 51.5
Subject 490 9 489
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004972880.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 594 114 590 0.0 86 71.5 75.8
Subject 511 1 510
Annot PREDICTED: aromatic-L-amino-acid decarboxylase-like [Setaria italica]
IRGSP Os08t0140300-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 594 114 590 0.0 86.5 70.4 74.6
Subject 514 1 514
Annot
Sbicolor Sobic.007G035500.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 594 114 590 0.0 87.4 70.2 75.1
Subject 519 1 513
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g01730.1.am.mk length: 594 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 7.5e-35 171-408
409-519
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 9.4e-52 142-161
165-182
183-202
209-228
230-248
249-268
457-472
500-519
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.5e-18 220-408
409-471
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 2e-35 472-587
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.4e-107 137-590
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 6.9e-28 138-217
HMMPanther PTHR11999 GROUP 3.3e-210 135-590
HMMPanther PTHR11999:SF11 AROMATIC 3.3e-210 135-590
Seg seg seg NA 18-29
221-233
253-264
275-287
389-401
Pseudomolecule
Chromosome Start End Strand
14804935807191-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker_non_over exon 804935 805495 . - . ID=Zjn_sc00071.1.g01730.1.am.mk:exon:2
Zjn_sc00071.1 maker_non_over exon 805968 807191 . - . ID=Zjn_sc00071.1.g01730.1.am.mk:exon:1

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