Z. japonica Nagirizaki
Zjn_sc00071.1.g01720.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 231 1 128 2e-33 212.1 26.8 39
Subject 490 79 198
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004979848.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 231 1 135 4e-58 223.4 51.5 53.2
Subject 516 91 229
Annot PREDICTED: aromatic-L-amino-acid decarboxylase-like [Setaria italica]
IRGSP Os08t0140300-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 231 1 143 4e-56 222.5 52.8 55
Subject 514 92 238
Annot
Sbicolor Sobic.007G035300.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 231 1 135 4e-54 225.5 50.2 53.2
Subject 521 93 231
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g01720.1.am.mk length: 231 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 8e-34 1-128
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 1.1e-23 6-25
27-45
76-96
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2e-27 17-128
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.8e-24 1-128
no_ID  
HMMPanther PTHR11999 GROUP 1.7e-55 1-128
HMMPanther PTHR11999:SF11 AROMATIC 1.7e-55 1-128
Seg seg seg NA 18-30
50-61
70-85
217-231
Pseudomolecule
Chromosome Start End Strand
14801870803811-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker_non_over exon 801870 802024 . - . ID=Zjn_sc00071.1.g01720.1.am.mk:exon:3
Zjn_sc00071.1 maker_non_over exon 803012 803170 . - . ID=Zjn_sc00071.1.g01720.1.am.mk:exon:2
Zjn_sc00071.1 maker_non_over exon 803430 803811 . - . ID=Zjn_sc00071.1.g01720.1.am.mk:exon:1

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