Z. japonica Nagirizaki
Zjn_sc00071.1.g01700.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 15 515 e-146 68.7 33 47.3
Subject 490 4 488
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004972880.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 1 517 0.0 71.7 66.1 68.9
Subject 511 1 511
Annot PREDICTED: aromatic-L-amino-acid decarboxylase-like [Setaria italica]
IRGSP Os08t0140300-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 1 516 0.0 72.1 64.4 67.2
Subject 514 1 514
Annot
Sbicolor Sobic.007G035500.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 713 1 517 0.0 72.8 64 67.7
Subject 519 1 514
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g01700.1.am.mk length: 713 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 2.4e-124 57-445
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 3e-56 28-47
51-68
69-88
95-114
116-134
165-185
383-398
426-445
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 5.4e-98 106-397
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.1e-35 398-514
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.9e-128 23-516
IPR021115 Pyridoxal-phosphate binding site
Molecular Function GO:0016831 carboxy-lyase activity    
PatternScan PS00392 DDC_GAD_HDC_YDC NA 327-348
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 8.9e-28 24-103
HMMPanther PTHR11999 GROUP 2.5e-247 21-556
HMMPanther PTHR11999:SF11 AROMATIC 2.5e-247 21-556
Seg seg seg NA 107-119
139-150
157-167
275-287
567-601
674-702
Pseudomolecule
Chromosome Start End Strand
14791205794968+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker_non_over exon 791205 792127 . + . ID=Zjn_sc00071.1.g01700.1.am.mk:exon:1
Zjn_sc00071.1 maker_non_over exon 792555 793199 . + . ID=Zjn_sc00071.1.g01700.1.am.mk:exon:2
Zjn_sc00071.1 maker_non_over exon 794395 794968 . + . ID=Zjn_sc00071.1.g01700.1.am.mk:exon:3

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