Z. japonica Nagirizaki
Zjn_sc00071.1.g01650.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G14520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 13 259 1e-27 175.9 26.7 41.6
Subject 605 63 377
Annot | Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr3:4875868-4878243 REVERSE LENGTH=605
NR ref|XP_004972882.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 1 259 3e-85 158.4 48 60.8
Subject 545 1 323
Annot PREDICTED: (E)-beta-farnesene synthase-like [Setaria italica]
IRGSP Os08t0168000-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 9 257 5e-55 169.2 35.2 48
Subject 582 50 354
Annot
Sbicolor Sobic.007G055600.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 11 259 9e-54 159 35.8 48.8
Subject 547 17 321
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g01650.1.am.mk length: 344 aa.
IPR001906 Terpene synthase, N-terminal domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
Gene3D G3DSA:1.50.30.10 no description 1e-21 39-124
HMMPfam PF01397 Terpene_synth 1.3e-25 22-125
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 3e-30 163-259
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 5.8e-35 18-158
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 4.3e-22 125-259
260-344
superfamily SSF48576 Terpenoid 6.9e-16 158-259
260-344
no_ID  
HMMPanther PTHR31225 FAMILY 5.4e-55 8-259
Seg seg seg NA 136-147
Pseudomolecule
Chromosome Start End Strand
14771433774173-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker_non_over exon 771433 771683 . - . ID=Zjn_sc00071.1.g01650.1.am.mk:exon:5
Zjn_sc00071.1 maker_non_over exon 772686 772912 . - . ID=Zjn_sc00071.1.g01650.1.am.mk:exon:4
Zjn_sc00071.1 maker_non_over exon 772993 773176 . - . ID=Zjn_sc00071.1.g01650.1.am.mk:exon:3
Zjn_sc00071.1 maker_non_over exon 773458 773722 . - . ID=Zjn_sc00071.1.g01650.1.am.mk:exon:2
Zjn_sc00071.1 maker_non_over exon 774066 774173 . - . ID=Zjn_sc00071.1.g01650.1.am.mk:exon:1

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