Z. japonica Nagirizaki
Zjn_sc00071.1.g01080.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G13440.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 2 278 e-136 110.7 85 92.1
Subject 310 12 309
Annot | Symbols: GAPC-2, GAPC2 | glyceraldehyde-3-phosphate dehydrogenase C2 | chr1:4608465-4610494 REVERSE LENGTH=310
NR gb|AEP31954.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 2 280 e-148 120.4 95.7 97.5
Subject 337 10 337
Annot glyceraldehyde-3-phosphate dehydrogenase [Aeluropus lagopoides]
IRGSP Os08t0126300-02_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 2 280 e-146 120.4 91.4 96.8
Subject 337 10 337
Annot
Sbicolor Sobic.007G025400.3.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 1 280 e-147 117.5 92.9 96.8
Subject 329 1 329
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g01080.1.sm.mkhc length: 280 aa.
IPR016040 NAD(P)-binding domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.720 no description 1.7e-39 2-105
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00044 Gp_dh_N 1.7e-32 2-107
HMMSmart SM00846 Glyceraldehyde 1.2e-39 1-117
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02800 Gp_dh_C 3.7e-73 103-259
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00078 G3PDHDRGNASE 1.1e-26 118-134
175-192
215-230
HMMPIR PIRSF000149 Glyceraldehyde-3-phosphate 1.2e-116 1-280
HMMPanther PTHR10836 GLYCERALDEHYDE 1.1e-199 2-280
no_ID  
Gene3D G3DSA:3.30.360.10 no description 1.6e-78 106-261
superfamily SSF51735 NAD(P)-binding 2.6e-36 2-119
superfamily SSF55347 Glyceraldehyde-3-phosphate 9.4e-77 103-260
Pseudomolecule
Chromosome Start End Strand
14538110541546+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker exon 538110 538205 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:1
Zjn_sc00071.1 maker exon 538476 538576 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:2
Zjn_sc00071.1 maker exon 538941 539056 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:3
Zjn_sc00071.1 maker exon 539151 539250 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:4
Zjn_sc00071.1 maker exon 539923 539983 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:5
Zjn_sc00071.1 maker exon 540068 540165 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:6
Zjn_sc00071.1 maker exon 540571 540713 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:7
Zjn_sc00071.1 maker exon 540912 540995 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:8
Zjn_sc00071.1 maker exon 541119 541546 . + . ID=Zjn_sc00071.1.g01080.1.sm.mkhc:exon:9

Top