Z. japonica Nagirizaki
Zjn_sc00071.1.g00880.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G79500.4 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 8 100 2e-34 149.5 34 40.7
Subject 290 7 99
Annot | Symbols: AtkdsA1 | Aldolase-type TIM barrel family protein | chr1:29903604-29905989 FORWARD LENGTH=290
NR ref|XP_004960768.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 1 100 3e-39 150 42.8 45.4
Subject 291 1 100
Annot PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase [Setaria italica]
IRGSP Os12t0210800-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 1 100 9e-40 150 41.2 44.3
Subject 291 1 100
Annot
Sbicolor Sobic.008G075200.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 1 100 7e-43 150 44.3 45.9
Subject 291 1 100
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00071.1.g00880.1.sm.mk length: 194 aa.
IPR006218 DAHP synthetase I/KDSA
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00793 DAHP_synth_1 2.2e-21 15-100
IPR006269 3-deoxy-8-phosphooctulonate synthase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0008676 3-deoxy-8-phosphooctulonate synthase activity    
HMMPanther PTHR21057:SF2 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE 3.2e-47 15-190
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 2e-13 16-100
103-181
no_ID  
Coil coil coiled-coil NA 162-183
HMMPanther PTHR21057 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE 3.2e-47 15-190
Seg seg seg NA 138-142
165-172
superfamily SSF51569 Aldolase 1.1e-11 2-100
103-187
Pseudomolecule
Chromosome Start End Strand
14478661482050-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00071.1 maker_non_over exon 478661 478717 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:9
Zjn_sc00071.1 maker_non_over exon 478794 478841 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:8
Zjn_sc00071.1 maker_non_over exon 478958 479005 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:7
Zjn_sc00071.1 maker_non_over exon 479121 479207 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:6
Zjn_sc00071.1 maker_non_over exon 479601 479645 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:5
Zjn_sc00071.1 maker_non_over exon 481213 481278 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:4
Zjn_sc00071.1 maker_non_over exon 481457 481553 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:3
Zjn_sc00071.1 maker_non_over exon 481634 481731 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:2
Zjn_sc00071.1 maker_non_over exon 482012 482050 . - . ID=Zjn_sc00071.1.g00880.1.sm.mk:exon:1

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