Z. japonica Nagirizaki
Zjn_sc00071.1.g00220.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_012702115.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
174 |
1 |
122 |
1e-30 |
329.9 |
44.3 |
52.9 |
| Subject |
574 |
1 |
124 |
|
| Annot |
PREDICTED: uncharacterized protein LOC101754375 isoform X1 [Setaria italica] |
| IRGSP |
Os08t0105000-02_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
174 |
126 |
171 |
1e-14 |
323.6 |
19 |
23 |
| Subject |
563 |
209 |
254 |
|
| Annot |
|
| Sbicolor |
Sobic.007G004200.1.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
174 |
1 |
122 |
4e-20 |
316.7 |
35.1 |
39.7 |
| Subject |
551 |
1 |
120 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00071.1.g00220.1.sm.mkhc |
length: 174 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
7-22 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 14 | 110921 | 114767 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00071.1 |
maker |
exon |
110921 |
111076 |
. |
+ |
. |
ID=Zjn_sc00071.1.g00220.1.sm.mkhc:exon:1 |
| Zjn_sc00071.1 |
maker |
exon |
111338 |
111559 |
. |
+ |
. |
ID=Zjn_sc00071.1.g00220.1.sm.mkhc:exon:2 |
| Zjn_sc00071.1 |
maker |
exon |
114358 |
114447 |
. |
+ |
. |
ID=Zjn_sc00071.1.g00220.1.sm.mkhc:exon:3 |
| Zjn_sc00071.1 |
maker |
exon |
114620 |
114664 |
. |
+ |
. |
ID=Zjn_sc00071.1.g00220.1.sm.mkhc:exon:4 |
| Zjn_sc00071.1 |
maker |
exon |
114756 |
114767 |
. |
+ |
. |
ID=Zjn_sc00071.1.g00220.1.sm.mkhc:exon:5 |