Z. japonica Nagirizaki
Zjn_sc00069.1.g01990.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G46280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 487 1 396 e-100 159.3 44.4 54
Subject 776 1 433
Annot | Symbols: MCM3 | Minichromosome maintenance (MCM2/3/5) family protein | chr5:18769902-18773606 REVERSE LENGTH=776
NR ref|XP_008654357.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 487 1 396 e-143 158.1 60.2 63.9
Subject 770 1 438
Annot PREDICTED: uncharacterized protein LOC100193296 isoform X1 [Zea mays] gi|413949662|gb|AFW82311.1| putative mini-chromosome maintenance (MCM) complex protein family [Zea mays]
IRGSP Os05t0476200-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 487 1 396 e-142 158.1 58.9 63.4
Subject 770 1 438
Annot
Sbicolor Sobic.006G087500.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 487 1 396 e-146 155.6 60.2 63.9
Subject 758 1 438
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00069.1.g01990.1.sm.mk length: 487 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00493 MCM 3.3e-08 280-342
355-423
HMMSmart SM00350 minichromosome 1.7e-21 153-443
ProfileScan PS50051 MCM_2 24.609 286-352
IPR008046 DNA replication licensing factor Mcm3
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01659 MCMPROTEIN3 7.6e-10 177-191
203-215
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 7.5e-21 185-256
superfamily SSF50249 Nucleic 1.2e-36 54-255
IPR027925 MCM N-terminal domain
HMMPfam PF14551 MCM_N 4.1e-11 12-168
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.1e-05 267-336
HMMPanther PTHR11630 DNA 6.1e-119 1-467
HMMPanther PTHR11630:SF46 DNA 6.1e-119 1-467
Seg seg seg NA 25-38
446-457
Pseudomolecule
Chromosome Start End Strand
201364585213650119-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00069.1 maker_non_over exon 920484 920806 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:1
Zjn_sc00069.1 maker_non_over exon 920853 921033 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:2
Zjn_sc00069.1 maker_non_over exon 921505 921743 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:3
Zjn_sc00069.1 maker_non_over exon 921831 921941 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:4
Zjn_sc00069.1 maker_non_over exon 922155 922309 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:5
Zjn_sc00069.1 maker_non_over exon 922922 923127 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:6
Zjn_sc00069.1 maker_non_over exon 923315 923374 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:7
Zjn_sc00069.1 maker_non_over exon 923770 923933 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:8
Zjn_sc00069.1 maker_non_over exon 924727 924751 . + . ID=Zjn_sc00069.1.g01990.1.sm.mk:exon:9

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