Z. japonica Nagirizaki
Zjn_sc00069.1.g01560.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G45140.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 872 107 872 0.0 102.8 45 57.5
Subject 896 116 896
Annot | Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896
NR dbj|BAJ96200.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 872 81 872 0.0 106.5 58 68.1
Subject 929 77 929
Annot predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP Os12t0559200-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 872 1 872 0.0 105.7 57.9 69.6
Subject 922 1 922
Annot
Sbicolor Sobic.004G078600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 872 129 872 0.0 105.2 49.2 62
Subject 917 152 917
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00069.1.g01560.1.am.mk length: 872 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11771 LIPOXYGENASE 1.1e-292 125-872
IPR001024 PLAT/LH2 domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.60.60.20 no description 4.1e-28 90-219
HMMPfam PF01477 PLAT 1e-07 117-197
HMMSmart SM00308 Lipoxygenase 3.2e-08 85-199
ProfileScan PS50095 PLAT 15.462 71-197
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00468 PLTLPOXGNASE 1.5e-28 167-185
279-298
489-513
780-794
IPR008976 Lipase/lipooxygenase, PLAT/LH2
superfamily SSF49723 Lipase/lipooxygenase 5.9e-25 85-202
IPR013819 Lipoxygenase, C-terminal
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00087 LIPOXYGENASE 1.9e-20 536-553
554-571
574-594
HMMPfam PF00305 Lipoxygenase 7.3e-50 218-687
689-850
ProfileScan PS51393 LIPOXYGENASE_3 204.986 209-872
superfamily SSF48484 Lipoxigenase 4.7e-204 211-872
IPR020833 Lipoxygenase, iron binding site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00711 LIPOXYGENASE_1 NA 554-568
IPR020834 Lipoxygenase, conserved site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00081 LIPOXYGENASE_2 NA 581-591
IPR027433 Lipoxygenase, domain 3
Gene3D G3DSA:4.10.372.10 no description 1.8e-11 337-427
no_ID  
Gene3D G3DSA:1.20.245.10 no description 2e-49 552-687
689-872
Gene3D G3DSA:3.10.450.60 no description 1.6e-39 428-550
Gene3D G3DSA:4.10.375.10 no description 7.1e-29 220-309
HMMPanther PTHR11771:SF2 LIPOXYGENASE 1.1e-292 125-872
Seg seg seg NA 219-231
278-290
309-322
Pseudomolecule
Chromosome Start End Strand
201383159713845141+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00069.1 maker_non_over exon 725462 726019 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:10
Zjn_sc00069.1 maker_non_over exon 732148 732262 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:9
Zjn_sc00069.1 maker_non_over exon 732335 732601 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:8
Zjn_sc00069.1 maker_non_over exon 732699 733006 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:7
Zjn_sc00069.1 maker_non_over exon 737049 737117 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:6
Zjn_sc00069.1 maker_non_over exon 737195 737280 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:5
Zjn_sc00069.1 maker_non_over exon 737417 737714 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:4
Zjn_sc00069.1 maker_non_over exon 737739 738037 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:3
Zjn_sc00069.1 maker_non_over exon 738122 738430 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:2
Zjn_sc00069.1 maker_non_over exon 738697 739006 . - . ID=Zjn_sc00069.1.g01560.1.am.mk:exon:1

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