Z. japonica Nagirizaki
Zjn_sc00069.1.g01540.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G45140.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 706 20 706 e-177 126.9 50.7 64.7
Subject 896 137 896
Annot | Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896
NR gb|EMT05915.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 706 7 706 0.0 131.4 65.4 76.3
Subject 928 134 928
Annot Lipoxygenase 2.1, chloroplastic [Aegilops tauschii]
IRGSP Os12t0559200-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 706 5 706 0.0 130.6 58.4 72.4
Subject 922 122 922
Annot
Sbicolor Sobic.004G078600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 706 20 706 0.0 129.9 54.8 70
Subject 917 152 917
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00069.1.g01540.1.sm.mkhc length: 706 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11771 LIPOXYGENASE 3.9e-291 19-706
IPR001024 PLAT/LH2 domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.60.60.20 no description 9.4e-27 10-100
HMMPfam PF01477 PLAT 1.5e-07 20-78
HMMSmart SM00308 Lipoxygenase 0.0025 2-88
ProfileScan PS50095 PLAT 16.291 1-85
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00468 PLTLPOXGNASE 1.5e-19 55-73
83-104
122-138
151-170
IPR008976 Lipase/lipooxygenase, PLAT/LH2
superfamily SSF49723 Lipase/lipooxygenase 4.4e-20 9-91
IPR013819 Lipoxygenase, C-terminal
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00087 LIPOXYGENASE 1e-20 336-353
354-371
374-394
HMMPfam PF00305 Lipoxygenase 2.6e-166 98-163
183-281
283-684
ProfileScan PS51393 LIPOXYGENASE_3 212.718 90-706
superfamily SSF48484 Lipoxigenase 1.3e-215 92-706
IPR020833 Lipoxygenase, iron binding site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00711 LIPOXYGENASE_1 NA 354-368
IPR020834 Lipoxygenase, conserved site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00081 LIPOXYGENASE_2 NA 381-391
IPR027433 Lipoxygenase, domain 3
Gene3D G3DSA:4.10.372.10 no description 1e-17 180-274
no_ID  
Coil coil coiled-coil NA 645-666
Gene3D G3DSA:1.20.245.10 no description 1.9e-135 352-706
Gene3D G3DSA:3.10.450.60 no description 7.1e-23 283-350
Gene3D G3DSA:4.10.375.10 no description 4.9e-30 101-163
HMMPanther PTHR11771:SF2 LIPOXYGENASE 3.9e-291 19-706
Seg seg seg NA 220-230
Pseudomolecule
Chromosome Start End Strand
201384942913852916+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00069.1 maker exon 717687 718674 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:7
Zjn_sc00069.1 maker exon 718783 719049 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:6
Zjn_sc00069.1 maker exon 719150 719385 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:5
Zjn_sc00069.1 maker exon 719849 719934 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:4
Zjn_sc00069.1 maker exon 720041 720304 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:3
Zjn_sc00069.1 maker exon 720580 720805 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:2
Zjn_sc00069.1 maker exon 720908 721174 . - . ID=Zjn_sc00069.1.g01540.1.sm.mkhc:exon:1

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