Z. japonica Nagirizaki
Zjn_sc00069.1.g01170.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G03760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 114 345 7e-84 138.1 36 47.2
Subject 533 10 232
Annot | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533
NR ref|XP_004965827.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 103 345 4e-99 139.4 46.9 53.1
Subject 538 1 237
Annot PREDICTED: probable mannan synthase 9 [Setaria italica]
IRGSP Os06t0625700-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 104 345 9e-87 136.5 40.4 48.2
Subject 527 4 227
Annot
Sbicolor Sobic.010G197300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 103 345 1e-84 138.9 43.3 50
Subject 536 1 235
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00069.1.g01170.1.am.mk length: 386 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 1.2e-10 201-344
HMMPanther PTHR32044 FAMILY 2.4e-120 115-338
HMMPanther PTHR32044:SF0 SUBFAMILY 2.4e-120 115-338
HMMPfam PF13641 Glyco_tranf_2_3 1.1e-15 202-337
Seg seg seg NA 10-24
132-146
162-186
superfamily SSF53448 Nucleotide-diphospho-sugar 1.2e-22 197-371
Pseudomolecule
Chromosome Start End Strand
201400674314009574+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00069.1 maker_non_over exon 561029 561173 . - . ID=Zjn_sc00069.1.g01170.1.am.mk:exon:5
Zjn_sc00069.1 maker_non_over exon 561256 561503 . - . ID=Zjn_sc00069.1.g01170.1.am.mk:exon:4
Zjn_sc00069.1 maker_non_over exon 561582 561710 . - . ID=Zjn_sc00069.1.g01170.1.am.mk:exon:3
Zjn_sc00069.1 maker_non_over exon 561778 562386 . - . ID=Zjn_sc00069.1.g01170.1.am.mk:exon:2
Zjn_sc00069.1 maker_non_over exon 563831 563860 . - . ID=Zjn_sc00069.1.g01170.1.am.mk:exon:1

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