Z. japonica Nagirizaki
Zjn_sc00069.1.g00180.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G17890.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 655 328 655 e-151 50.1 37.9 43.8
Subject 328 2 328
Annot | Symbols: GER2 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:6154478-6155596 REVERSE LENGTH=328
NR gb|AFW87570.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 655 319 655 e-177 57.4 46.7 48.1
Subject 376 46 376
Annot GDP-L-fucose synthase 1 [Zea mays]
IRGSP Os06t0652400-02_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 655 322 655 e-175 50.1 45.3 47.3
Subject 328 1 328
Annot
Sbicolor Sobic.010G212200.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 655 322 655 e-176 50.1 45.8 47.5
Subject 328 1 328
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00069.1.g00180.1.am.mkhc length: 655 aa.
IPR000612 Proteolipid membrane potential modulator
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF01679 Pmp3 1.2e-17 241-290
PatternScan PS01309 UPF0057 NA 246-261
IPR001509 NAD-dependent epimerase/dehydratase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 9.2e-71 348-580
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 4.6e-46 553-592
no_ID  
Gene3D G3DSA:3.90.25.10 no description 2.3e-38 593-639
HMMPanther PTHR10366 NAD 1.7e-223 341-655
HMMPanther PTHR10366:SF146PUTATIVE UNCHARACTERIZED 1.7e-223 341-655
Seg seg seg NA 36-65
76-97
superfamily SSF51735 NAD(P)-binding 3.6e-75 346-649
Pseudomolecule
Chromosome Start End Strand
201447855214485908+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00069.1 maker exon 84695 85659 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:9
Zjn_sc00069.1 maker exon 85732 85823 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:8
Zjn_sc00069.1 maker exon 86892 87010 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:7
Zjn_sc00069.1 maker exon 87132 87278 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:6
Zjn_sc00069.1 maker exon 87353 87478 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:5
Zjn_sc00069.1 maker exon 88493 88538 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:4
Zjn_sc00069.1 maker exon 88931 89088 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:3
Zjn_sc00069.1 maker exon 91505 91712 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:2
Zjn_sc00069.1 maker exon 91945 92051 . - . ID=Zjn_sc00069.1.g00180.1.am.mkhc:exon:1

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